Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • fghd
    Junior Member
    • Aug 2013
    • 7

    #1

    DNA strands coding in fasta file

    Hi,

    my question is:

    how two strands of a DNA molecule are coded in a chromosome file in fasta format. Are each line coded each strands or first half of the file codes one strands and the other half codes the second strands?

    Thanks
  • apredeus
    Senior Member
    • Jul 2012
    • 151

    #2
    It's not there at all, it's just the plus strand. The minus is complementary, so there's no need to make the fasta files twice as long

    Comment

    • fghd
      Junior Member
      • Aug 2013
      • 7

      #3
      Thanks for your response.

      So, chromosome fasta file includes a single strands of DNA?

      Comment

      • GenoMax
        Senior Member
        • Feb 2008
        • 7142

        #4
        Originally posted by fghd View Post
        So, chromosome fasta file includes a single strands of DNA?
        Any fasta format DNA/RNA sequence file will include only one strand (normally top strand in the 5' --> 3') orientation. You can infer the sequence for the other strand based on this information.
        Last edited by GenoMax; 08-13-2013, 10:38 AM.

        Comment

        • apredeus
          Senior Member
          • Jul 2012
          • 151

          #5
          yes, at least the ones I have seen.

          Comment

          Latest Articles

          Collapse

          • SEQadmin2
            Beyond CRISPR/Cas9: Understand, Choose, and Use the Right Genome Editing Tool
            by SEQadmin2



            CRISPR/Cas9 sparked the gene editing revolution for both research and therapeutics.1 But this system still showed severe issues that limited its applications. The most prominent were the heavy reliance on PAM sequences, delivery limitations, double-stranded breaks that prompt unintended edits and cell death, and editing inefficiency (both in targeting and in knock-in reliability).

            Despite this, “CRISPR helped turn genome editing from a specialized technique into
            ...
            07-31-2026, 11:01 AM
          • SEQadmin2
            Proteomic Platforms: How to Choose the Right Analytical Strategy to Improve Detection and Clinical Applications
            by SEQadmin2


            Proteomics platforms are evolving rapidly, with advances in mass spectrometry and affinity-based approaches expanding what researchers can detect and at what scale. As the field moves toward deeper proteome coverage and clinical applications, scientists face an increasingly complex landscape of tools. This article will explore how researchers are navigating these choices to find the right platform for their work.

            The systematic characterization of the human proteome has
            ...
            07-20-2026, 11:48 AM

          ad_right_rmr

          Collapse

          News

          Collapse

          Topics Statistics Last Post
          Started by SEQadmin2, Today, 10:05 AM
          0 responses
          5 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 08-13-2026, 12:22 PM
          0 responses
          31 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 08-11-2026, 10:35 AM
          0 responses
          24 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 08-06-2026, 07:41 AM
          0 responses
          38 views
          0 reactions
          Last Post SEQadmin2  
          Working...