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  • atma_weapon
    Member
    • May 2012
    • 11

    #1

    Go terms enrichment visualization

    hello, I have a list of Go terms enrichments of a RNAseq differential expression, in the way "GOterm: p-value", I would like to know if there exists a tool for a cool visualization of these results that could be meaningful to biologists...thanks
  • dariober
    Senior Member
    • May 2010
    • 311

    #2
    Originally posted by atma_weapon View Post
    hello, I have a list of Go terms enrichments of a RNAseq differential expression, in the way "GOterm: p-value", I would like to know if there exists a tool for a cool visualization of these results that could be meaningful to biologists...thanks
    Check Revigo http://revigo.irb.hr/. It takes as input a list of "GOterm: p-value" and clusters terms by similarity.
    Dario

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    • simonandrews
      Simon Andrews
      • May 2009
      • 870

      #3
      Originally posted by dariober View Post
      Check Revigo http://revigo.irb.hr/. It takes as input a list of "GOterm: p-value" and clusters terms by similarity.
      Dario
      Thanks Dario - that looks really interesting, I'll definitely have a play with that.

      Along similar lines we've also used Enrichment Map.

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