I have a number of data files all in the SGR (.sgr) file format. However, I need them to be in WIGGLE (.wig) format for some computational analysis. Can anyone instruct me on how to convert these files? Any help would be extremely appreciated!!
Header Leaderboard Ad
Collapse
Converting .sgr to .wig
Collapse
Announcement
Collapse
No announcement yet.
X
-
There is a perl script posted in this thread that should do what you need. https://groups.google.com/forum/#!to...ts/L9KrNnuxQ7k
Change the hard coded file names to ones you want (if you are going to do this for one file). Since you have multiple files there are suggestion for modifications you can make to make the script flexible.
Latest Articles
Collapse
-
Differential Expression and Data Visualization: Recommended Tools for Next-Level Sequencing Analysisby seqadmin
After covering QC and alignment tools in the first segment and variant analysis and genome assembly in the second segment, we’re wrapping up with a discussion about tools for differential gene expression analysis and data visualization. In this article, we include recommendations from the following experts: Dr. Mark Ziemann, Senior Lecturer in Biotechnology and Bioinformatics, Deakin University; Dr. Medhat Mahmoud Postdoctoral Research Fellow at Baylor College of Medicine;...-
Channel: Articles
05-23-2023, 12:26 PM -
-
by seqadmin
Continuing from our previous article, we share variant analysis and genome assembly tools recommended by our experts Dr. Medhat Mahmoud, Postdoctoral Research Fellow at Baylor College of Medicine, and Dr. Ming "Tommy" Tang, Director of Computational Biology at Immunitas and author of From Cell Line to Command Line.
Variant detection and analysis tools
Mahmoud classifies variant detection work into two main groups: short variants (<50...-
Channel: Articles
05-19-2023, 10:03 AM -
-
by seqadmin
With new tools and computational resources being released regularly, it can be hard to determine which are best suited for the analysis process and which older tools continue to be maintained. In an effort to assist the sequencing community, we interviewed three highly skilled bioinformaticians about their recommended tools for several important analysis applications.
Quality control and preprocessing tools
“Garbage in, garbage out” is a popular...-
Channel: Articles
05-16-2023, 10:11 AM -
ad_right_rmr
Collapse
News
Collapse
Topics | Statistics | Last Post | ||
---|---|---|---|---|
Exploring French-Canadian Ancestry: Insights into Migration, Settlement Patterns, and Genetic Structure
by seqadmin
Started by seqadmin, Yesterday, 09:22 AM
|
0 responses
8 views
0 likes
|
Last Post
by seqadmin
Yesterday, 09:22 AM
|
||
Started by seqadmin, 05-24-2023, 09:49 AM
|
0 responses
9 views
0 likes
|
Last Post
by seqadmin
05-24-2023, 09:49 AM
|
||
Introducing ProtVar: A Web Tool for Contextualizing and Interpreting Human Missense Variation in Proteins
by seqadmin
Started by seqadmin, 05-23-2023, 07:14 AM
|
0 responses
27 views
0 likes
|
Last Post
by seqadmin
05-23-2023, 07:14 AM
|
||
Started by seqadmin, 05-18-2023, 11:36 AM
|
0 responses
113 views
0 likes
|
Last Post
by seqadmin
05-18-2023, 11:36 AM
|
Comment