Hi..
i used multicov to get read counts for specific genomic regions from different samples. Now, i would like to get expression values for those samples by normalizing the data. Can anyone suggest how i can proceed in doing that. i am attaching the sample output below
i used multicov to get read counts for specific genomic regions from different samples. Now, i would like to get expression values for those samples by normalizing the data. Can anyone suggest how i can proceed in doing that. i am attaching the sample output below
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Chromosome Name Start End Strand Sample 1 Sample 2 Sample 3 Sample 4 Sample 5 Sample 6 Gm01 75 93 + 0 0 0 0 0 0 Gm01 142 433 + 0 0 0 0 0 0 Gm01 42335623 42335702 + 631 84 42 76 98 112 Gm01 27758807 27763057 + 557 149 123 306 550 645 Gm01 50818678 50819255 + 529 264 120 11 102 64 Gm01 27753335 27757417 + 308 85 72 148 242 264
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