Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • mihuzx
    Member
    • Apr 2013
    • 20

    #1

    Blast+ Error: cannot get seq-data in range

    Hi, everyone
    I am using NCBI-BLAST-2.2.28+ to perform blastn-short blast for about 200 primers in one file. and The database is Zea mays genome(about 2Gb).
    the standalone blast program work well in my computer,but when run that data it put out an error:

    the main info is(more info in attachment file) :

    CSeqVector_CI::GetSeqData: cannot get seq-data in range:237097599-237097614

    please, who can tell me what is going wrong?
    Thanks
    Attached Files
  • GenoMax
    Senior Member
    • Feb 2008
    • 7142

    #2
    Not answering your question but in case you are stuck you could give "blat" a try instead.

    Comment

    • mihuzx
      Member
      • Apr 2013
      • 20

      #3
      thanks for your suggestion, I'll give it a try later~

      Comment

      • rhinoceros
        Senior Member
        • Apr 2013
        • 372

        #4
        Looks to me like you tried to compile blast from source (and failed somehow). Any good reason for not just using the official binaries?
        savetherhino.org

        Comment

        Latest Articles

        Collapse

        • SEQadmin2
          16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
          by SEQadmin2





          NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
          10-30-2026, 06:46 AM
        • SEQadmin2
          Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
          by SEQadmin2



          Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

          Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
          ...
          10-14-2026, 09:55 AM

        ad_right_rmr

        Collapse

        News

        Collapse

        Topics Statistics Last Post
        Started by SEQadmin2, Yesterday, 07:59 AM
        0 responses
        15 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 11-05-2026, 09:25 AM
        0 responses
        32 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 11-03-2026, 11:54 AM
        0 responses
        46 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-28-2026, 09:57 AM
        0 responses
        172 views
        0 reactions
        Last Post SEQadmin2  
        Working...