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  • MerFer
    Member
    • Sep 2009
    • 21

    #1

    MACS2 bdgdiff output empty

    Hi all,

    I am trying to run macs2 bdgdiff

    my command line

    macs2 bdgdiff --t1 KO_treat_pileup.bdg --c1 KO_control_lambda.bdg --t2 WT_treat_pileup.bdg --c2 WT_control_lambda.bdg --d1 33438858 --d2 38068471 -g 60 -l 120 --o-prefix diff_KOvsWT

    Everything works fine and I get no errors etc.,
    b the result files are empty.
    Do I miss something?

    Thanks a lot,

    Maria

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