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  • deuterium
    Junior Member
    • Mar 2012
    • 8

    fail to download genome sequence indexes

    Dear all,
    When I downloaded mouse genome sequence indexes (Ensembl NCBIM37, 14428 MB) from http://cufflinks.cbcb.umd.edu/igenomes.html with the tool of filezilla or Uget under linux environment or filezilla under windows environment, the file always stopped at about 2.1GB and could not open successfully, could anyone help me how to get the complete file? Thank you very much for your kindly help!
  • dpryan
    Devon Ryan
    • Jul 2011
    • 3478

    #2
    I'm guessing that this is an institutional IT issue, so just contact your local IT department for help.

    Comment

    • GenoMax
      Senior Member
      • Feb 2008
      • 7142

      #3
      Are you using 32-bit OS by chance? You may be running into 2GB individual file size restriction of 32-bit linux (and probably windows).

      Comment

      • deuterium
        Junior Member
        • Mar 2012
        • 8

        #4
        Originally posted by GenoMax View Post
        Are you using 32-bit OS by chance? You may be running into 2GB individual file size restriction of 32-bit linux (and probably windows).
        My linux and Windows are both 64-bit OS actually...

        Comment

        • GenoMax
          Senior Member
          • Feb 2008
          • 7142

          #5
          Originally posted by deuterium View Post
          My linux and Windows are both 64-bit OS actually...
          Then we may have to come back to local IT "issue" possibility.

          You may also have better luck with getting the sequences from Illumina's iGenomes site: http://support.illumina.com/sequenci...e/igenome.html

          Comment

          • deuterium
            Junior Member
            • Mar 2012
            • 8

            #6
            Thank you very much! I have downloaded it completely from another institute!

            Originally posted by GenoMax View Post
            Then we may have to come back to local IT "issue" possibility.

            You may also have better luck with getting the sequences from Illumina's iGenomes site: http://support.illumina.com/sequenci...e/igenome.html

            Comment

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