Searching for non-coding RNAs

[Albet]

Hi

I am trying to find non-coding RNAs from WGS

I have attempted to use the ncRNAscout tool but I keep geeting an "out_of_range" error.

Does anyone know what this means? or what I may be doing wrong?

Or can anyone recommend another tool for searching for ncRNA in genome sequences?

Thanks

[ppgardne]

Rfam is your friend here!

[colindaven]

Alternatively get mirBase and/or Rfam and/or RNAcentral (how much information do you want), map to genome.