Example DESEQ2

[David Lyon]

Delete please

[dpryan]

Have you read the vignette?

[student-t]

There is a nice example in the vignette. What don't you give it a go? Put your commands here if you got stuck. Basically, you'll need to read in your count matrix file and specify the meta-data for your experiment.

[GenoMax]

@David Lyon: You may like this format. http://www.nathalievilla.org/doc/htm...q2-rnaseq.html

[student-t]

I'm doing it myself right now. I'm post a sample script that starts from the very beginning soon.