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  • David Lyon
    Member
    • May 2010
    • 11

    #1

    Example DESEQ2

    Delete please
    Last edited by David Lyon; 05-19-2015, 05:46 AM. Reason: Not an appropriate question
  • dpryan
    Devon Ryan
    • Jul 2011
    • 3478

    #2
    Have you read the vignette?

    Comment

    • student-t
      Member
      • Mar 2015
      • 16

      #3
      There is a nice example in the vignette. What don't you give it a go? Put your commands here if you got stuck. Basically, you'll need to read in your count matrix file and specify the meta-data for your experiment.

      Comment

      • GenoMax
        Senior Member
        • Feb 2008
        • 7142

        #4
        @David Lyon: You may like this format. http://www.nathalievilla.org/doc/htm...q2-rnaseq.html

        Comment

        • student-t
          Member
          • Mar 2015
          • 16

          #5
          I'm doing it myself right now. I'm post a sample script that starts from the very beginning soon.

          Comment

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