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  • ctard
    Junior Member
    • Sep 2015
    • 3
    #1

    Coding Potential Calculator

    Hi all !

    I've been using CPC for a while and I've just recently noticed their website is down, I can't make the script work with Linux

    I was wondering, do you experience the same problem with their platorm ? How come they closed it ?

    What do you do then to assess the coding potential of your transcripts ?

    Thanks so much !

    Best,

    Claire
    Tags: None
  • darked89
    Member
    • Jun 2009
    • 38
    #2
    The CPC site is up again. And the info about installation is here:
    404 Not Found
    http://cpc.cbi.pku.edu.cn/docs/install_guide.jsp


    I have not used it on the command line for a while but remember that some input and/or output file names were hard-coded in the scripts. Plus because it uses blast, there may be issues between i.e. blastall vs blast+ branches.

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