Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • schmima
    Member
    • Apr 2010
    • 56

    #1

    SAW - source code/binary out?

    I just read the paper 'SAW: A Method to Identify Splicing Events from RNA-Seq Data Based on Splicing Fingerprints'...

    What about the program itself? Anyone knows if there is a way to get it?
  • john_mu
    Member
    • May 2010
    • 88

    #2
    I'm guessing it is not ready for a general audience yet.

    You could try to email the Author

    http://www-personal.umich.edu/~kning/
    SpliceMap: De novo detection of splice junctions from RNA-seq
    Download SpliceMap Comment here

    Comment

    • Lee Sam
      Member
      • Oct 2008
      • 57

      #3
      I know Damian, the paper's second author. he's busy cleaning up the scripts that run the program to make them more user-friendly for distribution.

      Comment

      • schmima
        Member
        • Apr 2010
        • 56

        #4
        great - thanks for the information

        Comment

        Latest Articles

        Collapse

        • SEQadmin2
          16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
          by SEQadmin2





          NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
          10-30-2026, 06:46 AM
        • SEQadmin2
          Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
          by SEQadmin2



          Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

          Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
          ...
          10-14-2026, 09:55 AM

        ad_right_rmr

        Collapse

        News

        Collapse

        Topics Statistics Last Post
        Started by SEQadmin2, Today, 07:59 AM
        0 responses
        13 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 11-05-2026, 09:25 AM
        0 responses
        32 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 11-03-2026, 11:54 AM
        0 responses
        45 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-28-2026, 09:57 AM
        0 responses
        169 views
        0 reactions
        Last Post SEQadmin2  
        Working...