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  • Retreaving results from online tool

    Hi everyone!
    I need to check my transcriptome sequences through many online tools. But of course all they have a program input limit. I want to analyse my data through tools http://www.camp.bicnirrh.res.in/predict/, http://bioinformatics.cs.ntou.edu.tw/ADAM/svm_tool.html and http://www.imtech.res.in/raghava/cel...ubmit_prot.php a
    nd I want to do it through my console, because I have approximately 10.000.000 sequences. For this, I plan get a little number of sequences from my fasta file, input it in tool window, get a result, save it and repeat the algorithm. My knowledge in Perl and Python is very poor, I would be very greatful if somebody could give me an advice how to do this?

  • #2
    Probably the best would be to see whether these tools exist in standalone version...

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    • #3
      I've already checked this tools, they don't have such options unfortunatelly.

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