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  • anyone1985
    Member
    • Mar 2009
    • 68

    #1

    Any good idea for assembling 454 and Solexa mate-pair data

    New, I am working to assemble 454 (2.9G), Solexa pair-end (insert length = 400bp, read length = 120bp) and mate-pair (insert length = 3K and 5K, read length = 36bp). I have tried many software, velvet and mira, or methods in papers, but the results were not good. Is there any good method to assemble them.

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