Hi, I would like to know if it is possible to simulate a small RNA-seq dataset because I found tools only for RNA seq.
Thank you.
Thank you.
-
-
Perhaps you could clarify your goal? -
I would like to have a synthetic small RNA-seq for validation purposes.Comment
-
That's pretty vague. Since you are not stating any specific goals or metrics, I recommend you download some real small-RNA data from somewhere (such as SRA) and use that for validation. If you are not trying to measure anything in particular, real data is always better than synthetic data.Last edited by Brian Bushnell; 07-13-2016, 07:23 PM.Comment
-
Are you looking for small (as in amount of reads/data) or small as in small RNA-seq data?Comment
-
Small as in small RNA-seq data, like a real small rna sequencing for miRNAs.Comment
-
Thank you.Comment
-
Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating...10-14-2026, 09:55 AM -
Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing...
Comment