Does anyone knows if there is any good and accurate miRNA and siRNA prediction tool?
-
-
I remember from journal club that many, many such tools exist, with different quality and performance. Perhaps use more than one and compare the results of analysing a (large) test set. -
Hi,
You can try miRDeep or miRTrap . Can you explain a little bit more your question ( what type of data,..)
N.Comment
-
Can you also indicate your species? There are tools designed for plants or animals and some that might work on both.
I use the UEA sRNA toolkit a lot and thinks it's a great resource. Their mirCat tool does de novo miRNA identification. miRDeep is also worth a look.Comment
-
Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating...10-14-2026, 09:55 AM -
Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing...
Comment