We are a group of bioinformatics/genomics enthusiasts currently working on developing a streamlined platform for genomic analysis to be used in the research and healthcare community (for purposes of application in transnational medicine and basic science research). Our team consists of a biologist/progammer, engineer/programmer, and two MDs. The progress so far has been to develop a web-based demo to integrate the most commonly used bioinformatics tools into one platform with easy usability for the end user.
The efforts are opensource and use open source tools. Our goal however is to polish or even create new tools that are unique to the developing market's needs. Ultimately, our platform would help the end user run through a modifiable pipeline that is tailored to the end user's needs.
Our approach/focus is on:
• Data handling (compression, and optimization for use on cloud-based application)
• Data analysis (modifiable but within scope of most commonly used tools or technologies to study gene expression and other future prospects such as genome evolution and studies across multiple species/phylogenetics, pharmacogenetics, and proteomics)
• Data visualization (interactive data output tailored to the end user's needs in terms focusing on usable results)
Our team is currently in need of people with experience in:
• Programming (Java, Python) - also looking into the possibility of integrating machine learning into such a platform.
• Bioinformatics
• Mathematics or data science/statistics (MATLAB, R; for purposes of data compression algorithm development and analysis)
Again, our efforts are open source and serve the purpose of developing the end user experience in the research and healthcare world. Everyone on board is striving to learn more about the field during this endeavor. Our team members have varying levels of experience but are enthusiastic and continuing to show dedication to pushing the scientific community forward.
Best,
M Samour
Teleogene LLC
The efforts are opensource and use open source tools. Our goal however is to polish or even create new tools that are unique to the developing market's needs. Ultimately, our platform would help the end user run through a modifiable pipeline that is tailored to the end user's needs.
Our approach/focus is on:
• Data handling (compression, and optimization for use on cloud-based application)
• Data analysis (modifiable but within scope of most commonly used tools or technologies to study gene expression and other future prospects such as genome evolution and studies across multiple species/phylogenetics, pharmacogenetics, and proteomics)
• Data visualization (interactive data output tailored to the end user's needs in terms focusing on usable results)
Our team is currently in need of people with experience in:
• Programming (Java, Python) - also looking into the possibility of integrating machine learning into such a platform.
• Bioinformatics
• Mathematics or data science/statistics (MATLAB, R; for purposes of data compression algorithm development and analysis)
Again, our efforts are open source and serve the purpose of developing the end user experience in the research and healthcare world. Everyone on board is striving to learn more about the field during this endeavor. Our team members have varying levels of experience but are enthusiastic and continuing to show dedication to pushing the scientific community forward.
Best,
M Samour
Teleogene LLC
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