Hi, I want to select my target genes found in my ChIP-seq data (Genes Names by HOMER) within my Cuffdiff output list of differentially expressed genes (RNA-seq data), so I can select cufflinks genes ids of target genes (“XLOC_” ids), selecting the lines table from my cuffdiff file where are the specific target genes names, so I can create heatmaps of these genes using RNA-seq data in R. Can someone give me a simple solution?
I just want select gene names lines in my cuffdiff table
Thank you!
I just want select gene names lines in my cuffdiff table
Thank you!