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  • Febin@GC
    Junior Member
    • Apr 2017
    • 3
    #1

    MaSuRCA installation error

    Hi
    I was working on RNA sequence analysis of paired end sequence reads with Tuxedo pipeline. It required an additional installation of MaSuRCA genome assembler for assembling super reads. I downloaded the latest version, MaSuRCA-3.2.2_RC1 , and gave the following command in the MaSuRCA-3.2.2_RC1 directory for its installation.

    # sudo ./install.sh

    Since its a long output i have pasted it in paste bin and here is the corresponding pastebin link:

    MaSuRCA output - Pastebin.com
    https://pastebin.com/XLAT4itm
    Pastebin.com is the number one paste tool since 2002. Pastebin is a website where you can store text online for a set period of time.


    Due to the errors in between sr_config_example.txt file was not generated in MaSuRCA directory, and I couldn’t successfully run the perl command for assembling super reads. What could possibily be wrong here? Thanks in advance.

    Febin@GC
    Tags: rna seq
  • Febin@GC
    Junior Member
    • Apr 2017
    • 3
    #2
    Any updates?

    Comment

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