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  • iltisanni
    replied
    For those of you who are searching for something like me.

    Virulence factors are defined as those factors or agents that allow an organism to become established in a host or to maintain the disease state once an infection has been established. VFDB is a large collection of VFs from various medical significant bacterial pathogens


    I think this db is quite helpful and you can download it to yout local drive.

    Leave a comment:


  • iltisanni
    started a topic Database for pathogenomics

    Database for pathogenomics

    Hi,

    we sequenced some organisms and want to know whether they are human-pathogen (toxic).
    Does anyone know if a special database exists where I can scan my assembly scaffolds and check if my organism is pathogen?
    Last edited by iltisanni; 01-15-2018, 10:52 PM.

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  • seqadmin
    Investigating the Gut Microbiome Through Diet and Spatial Biology
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    The human gut contains trillions of microorganisms that impact digestion, immune functions, and overall health1. Despite major breakthroughs, we’re only beginning to understand the full extent of the microbiome’s influence on health and disease. Advances in next-generation sequencing and spatial biology have opened new windows into this complex environment, yet many questions remain. This article highlights two recent studies exploring how diet influences microbial...
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