Hi there,
does someone know a comprehensive tutorial for setting up a local installation of galaxy tools? Or is there even a source where one can download a complete installation including all the necessary reference files ?
So far I've managed to set it up and most of the tools are running. But some tools I can't get to work e.g. SIFT. Where can I download the tool dependencies for SIFT ? And can someone please explain how to deal with the reference genomes. I included my own and it works but sometimes the build names get messed up and won't work.
Any help ist much appreciated!
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Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
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