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  • rtyagi
    started a topic mitochondria in single nuclear RNAseq

    mitochondria in single nuclear RNAseq

    for snRNAseq, do people use mitochondrial filtering? I'm not sure if this still makes sense even though we are working with data from nuclei rather than whole cells, but I do see some expression of mito genes in my data.

    Also, is it preferable to filter the cells based on mito content or to regress it out?

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