FluxSimulator: FASTQ/FASTA output?

[mrfox]

I am working with the interesting tool FluxSimulator. Everything looks fine except that I could not get FASTQ/FASTA files. The input error model file I used was the "error_model_qualities.err" downloaded from the Flux project website.

Is there any trick to make the FASTQ/FASTA reads?
Thank you very much!

[mrfox]

The error message I got was:
java.lang.ArrayIndexOutOfBoundsException
at java.lang.System.arraycopy(Native Method)
at genome.sequencing.rnaseq.simulation.A.A(Unknown Source)
at genome.sequencing.rnaseq.simulation.A.A(Unknown Source)
at genome.sequencing.rnaseq.simulation.A$_A.A(Unknown Source)
at genome.sequencing.rnaseq.simulation.A$_A.run(Unknown Source)
at genome.sequencing.rnaseq.simulation.A.x(Unknown Source)
at genome.sequencing.rnaseq.simulation.A.run(Unknown Source)
at genome.sequencing.rnaseq.simulation.A.A.run(Unknown Source)
at java.lang.Thread.run(Thread.java:680)
at genome.sequencing.rnaseq.simulation.A.E$_A.run(Unknown Source)

[mrfox]

can anybody answer this question please? Thanks!

[mrfox]

Hi all,
I guess there is some problem with the build1223. I just found that earlier version works fine (at least on Linux platform)