MAQ error

[jyli]

When I tried to run MAQ for alignment, I ran into errors like following:

maq: match.cc:557: int ma_match(int, char**): Assertion `fp_bfa' failed.
/ifs1/home/jyli/.lsbatch/1234799677.211076: line 8: 25308 Aborted

Can anyone help with this?

Thanks.

Jianying

[Michael Jones]

I get the same error if I have a bad path to my Binary Fasta file.

[xiagnwulu]

maq match out.map ref.bfa reads.bfq

make sure you have the right file path and file name.