MAQ error

jyli

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Join Date: Nov 2008

Posts: 21
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#1

MAQ error

02-16-2009, 09:04 AM

When I tried to run MAQ for alignment, I ran into errors like following:

maq: match.cc:557: int ma_match(int, char**): Assertion `fp_bfa' failed.
/ifs1/home/jyli/.lsbatch/1234799677.211076: line 8: 25308 Aborted

Can anyone help with this?

Thanks.

Jianying
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Michael Jones

Junior Member

Join Date: Mar 2009

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#2

03-05-2009, 12:16 PM

I get the same error if I have a bad path to my Binary Fasta file.
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xiagnwulu

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Join Date: Jul 2013

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#3

07-17-2013, 01:47 AM

maq match out.map ref.bfa reads.bfq

make sure you have the right file path and file name.
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