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  • different softwares for whole-genome alignment?

    Hi everyone !
    i have to compare two genomes, i have test mugsy,last,lastz and something else,so i got different results, for mugsy,the aligned reads are long ,but for the last,and lastz ,the aligned reads are short,how can i integrate these results?

    Thanks in advance !
    Cheers

  • #2
    You can club the results in graphic format using photoshop or some other image editor.

    Comment


    • #3
      Originally posted by bbrij87 View Post
      You can club the results in graphic format using photoshop or some other image editor.
      hi,thank you for your reply.
      i didn't catch what you mean.i want to integrate these results to get a more accurate result.

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      • #4
        Can you let me know how you want to integrated the results? I thought you want to combine/compare them.

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        • #5
          Originally posted by bbrij87 View Post
          Can you let me know how you want to integrated the results? I thought you want to combine/compare them.
          combine,i think.the simplest way is to extract the common regions,but i will lose some large regions.so can you give me some tips to get more credible results?
          thank you very much

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