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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
NGS data for cancer line by CTC
Started by CTC, 01-31-2013, 10:30 AM
2 responses
1,701 views
0 reactions
 Last Post CTC
by CTC
01-31-2013, 12:23 PM  
Eliminate rRNA contamination with Bowtie by alisrpp
Started by alisrpp, 01-29-2013, 12:33 PM
2 responses
4,940 views
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 Last Post cascoamarillo
by cascoamarillo
01-31-2013, 10:42 AM  
questions on HotNet web server input by bioliyezhang
Started by bioliyezhang, 01-31-2013, 10:08 AM
0 responses
1,482 views
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 Last Post bioliyezhang
by bioliyezhang
01-31-2013, 10:08 AM  
COG database by pcs_murali
Started by pcs_murali, 01-30-2013, 02:25 PM
1 response
1,902 views
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 Last Post westerman
by westerman
01-31-2013, 09:54 AM  
generate fasta file from chipseq peaks by says_anova
Started by says_anova, 01-30-2013, 10:01 PM
3 responses
5,598 views
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 Last Post says_anova
by says_anova
01-31-2013, 09:40 AM  
BWA index segmentation fault by JMFA
Started by JMFA, 01-29-2013, 06:15 AM
6 responses
9,126 views
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 Last Post JMFA
by JMFA
01-31-2013, 09:06 AM  
BAM file containing ALL reads, next step? by chipnewb
Started by chipnewb, 01-31-2013, 08:50 AM
0 responses
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 Last Post chipnewb
by chipnewb
01-31-2013, 08:50 AM  
NGS reads condensation by bye
Started by bye, 01-29-2013, 01:16 PM
6 responses
1,974 views
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 Last Post krobison
by krobison
01-31-2013, 07:35 AM  
SAM: extract both pairs where at least one pair mapped by spabinger
Started by spabinger, 01-30-2013, 02:30 PM
4 responses
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 Last Post spabinger
by spabinger
01-31-2013, 05:45 AM  
GPU CUDA BLAST Efficiency by jjk
Started by jjk, 01-30-2013, 10:46 PM
2 responses
3,661 views
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 Last Post severin
by severin
01-31-2013, 04:22 AM  
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