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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
0 reactions
 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,261 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Fungal genome Annotation by Bgansw
Started by Bgansw, 11-04-2012, 07:49 PM
2 responses
1,903 views
0 reactions
 Last Post Apexy
by Apexy
11-05-2012, 01:06 AM  
Diagnosing samtools segfault by Bukowski
Started by Bukowski, 01-27-2012, 12:54 AM
3 responses
4,125 views
0 reactions
 Last Post Bernt.Popp
by Bernt.Popp
11-05-2012, 12:59 AM  
Incorrect calculation in Picard's CalculateHsMetrics? by frostzwerg
Started by frostzwerg, 11-05-2012, 12:55 AM
0 responses
1,879 views
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 Last Post frostzwerg
by frostzwerg
11-05-2012, 12:55 AM  
Is there a maximum number of reads able to be loaded into tophat by will.jackson
Started by will.jackson, 10-31-2012, 02:18 PM
1 response
1,393 views
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 Last Post will.jackson
by will.jackson
11-04-2012, 05:12 PM  
Test status in Cufflinks and Cuffdiff by qiongyi
Started by qiongyi, 08-24-2012, 04:41 AM
4 responses
3,866 views
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 Last Post sdriscoll
by sdriscoll
11-04-2012, 12:44 PM  
how to align concatenated and sheared sequences? by Lilach
Started by Lilach, 11-01-2012, 04:08 AM
2 responses
1,688 views
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 Last Post Lilach
by Lilach
11-04-2012, 08:17 AM  
About GATK by bewlib
Started by bewlib, 11-02-2012, 07:38 PM
1 response
1,573 views
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 Last Post vdauwera
by vdauwera
11-03-2012, 07:00 PM  
codeml fix_omega and omega by rahularjun86
Started by rahularjun86, 11-03-2012, 04:52 PM
0 responses
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 Last Post rahularjun86
by rahularjun86
11-03-2012, 04:52 PM  
Sequence Duplication by tahamasoodi
Started by tahamasoodi, 10-13-2012, 09:27 PM
11 responses
2,399 views
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 Last Post kopi-o
by kopi-o
11-03-2012, 11:35 AM  
Problem installing tophat by koustavpal
Started by koustavpal, 11-02-2012, 09:00 PM
1 response
1,724 views
0 reactions
 Last Post jk1124
by jk1124
11-03-2012, 11:27 AM  
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