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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,262 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Velvet-Insert Size by VNou
Started by VNou, 06-02-2012, 02:10 AM
3 responses
3,957 views
0 reactions
 Last Post cliffbeall
by cliffbeall
06-07-2012, 06:39 AM  
Nice installation guide of cygwin to emulate linux on windows by steven
Started by steven, 12-09-2010, 04:11 AM
1 response
4,288 views
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 Last Post neni
by neni
06-07-2012, 05:36 AM  
Specifying the region with "samtools mpileup -r " changes the output calls by vplagnol
Started by vplagnol, 06-07-2012, 04:26 AM
0 responses
3,903 views
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 Last Post vplagnol
by vplagnol
06-07-2012, 04:26 AM  
negative p-value in DEseq analysis by Marianna85
Started by Marianna85, 06-06-2012, 07:20 AM
7 responses
5,572 views
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 Last Post mbblack
by mbblack
06-07-2012, 04:05 AM  
Related SNPs to dbSNP by lyz1030
Started by lyz1030, 03-28-2011, 02:34 AM
1 response
1,923 views
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 Last Post ron128
by ron128
06-07-2012, 02:57 AM  
Does standalone Blat can take multiple chromosome in one command line, find matches? by ketan_bnf
Started by ketan_bnf, 10-10-2010, 09:51 PM
2 responses
2,019 views
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 Last Post zhiqiang
by zhiqiang
06-07-2012, 12:12 AM  
Zero FPKM at some Cufflinks output file by fuad193
Started by fuad193, 06-06-2012, 09:35 PM
1 response
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 Last Post kopi-o
by kopi-o
06-06-2012, 11:16 PM  
Illumina pair end read extraction. by JDinis
Started by JDinis, 06-06-2012, 10:09 AM
3 responses
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 Last Post Dario1984
by Dario1984
06-06-2012, 08:00 PM  
Mosaik Aligning with Solexa Reads by JimC
Started by JimC, 05-10-2009, 06:23 PM
5 responses
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 Last Post alig
by alig
06-06-2012, 05:07 PM  
samtools mpileup by vschulz
Started by vschulz, 04-09-2012, 10:49 AM
9 responses
6,223 views
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 Last Post evonne16
by evonne16
06-06-2012, 05:02 PM  
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