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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
105,520 views
0 likes
 Last Post Guest's Avatar
by Guest
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
673,682 views
1 like
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Help! a problem in CNVnator by yuhao
Started by yuhao, 07-12-2012, 06:17 AM
0 responses
1,596 views
0 likes
 Last Post yuhao
by yuhao
07-12-2012, 06:17 AM  
DESeq: pvalues are NA by dglemay
Started by dglemay, 06-27-2012, 04:12 PM
5 responses
2,271 views
0 likes
 Last Post Simon Anders
by Simon Anders
07-12-2012, 06:12 AM  
Why "zero values of GC correction" appears when doing CNVnator by yuhao
Started by yuhao, 07-12-2012, 05:53 AM
0 responses
1,586 views
0 likes
 Last Post yuhao
by yuhao
07-12-2012, 05:53 AM  
Comparing e-values from two blast reports by dsw0002
Started by dsw0002, 07-09-2012, 02:34 PM
5 responses
5,049 views
0 likes
 Last Post SES
by SES
07-12-2012, 05:51 AM  
calculate a base's distance to the read's 3' end by lyz1030
Started by lyz1030, 07-12-2012, 05:17 AM
2 responses
1,520 views
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 Last Post lyz1030
by lyz1030
07-12-2012, 05:36 AM  
A feature request for short read aligners by ymc
Started by ymc, 07-11-2012, 07:56 AM
3 responses
1,639 views
0 likes
 Last Post sphil
by sphil
07-12-2012, 05:18 AM  
RPKM followed by z-scoring by sphil
Started by sphil, 07-12-2012, 05:07 AM
0 responses
1,829 views
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 Last Post sphil
by sphil
07-12-2012, 05:07 AM  
HTseq count - all reads are "alignment_not_unique" by dmsoanes
Started by dmsoanes, 07-11-2012, 07:39 AM
2 responses
3,000 views
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 Last Post dmsoanes
by dmsoanes
07-12-2012, 05:07 AM  
comparetion features of ngs softwares by nagaraj
Started by nagaraj, 07-12-2012, 01:19 AM
2 responses
1,754 views
0 likes
 Last Post adaptivegenome
by adaptivegenome
07-12-2012, 03:45 AM  
How to calculate gene expression level by fgh1124
Started by fgh1124, 07-11-2012, 06:10 PM
1 response
2,148 views
0 likes
 Last Post kmcarr
by kmcarr
07-12-2012, 02:35 AM  
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