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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,261 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
small rna seq with total lane read count different between conditions by anle
Started by anle, 01-25-2012, 02:25 PM
0 responses
2,353 views
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 Last Post anle
by anle
01-25-2012, 02:25 PM  
Show filtered reads in the IGV? by MBender
Started by MBender, 01-25-2012, 01:04 PM
0 responses
1,951 views
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 Last Post MBender
by MBender
01-25-2012, 01:04 PM  
allele counts in bam by bair
Started by bair, 01-25-2012, 11:04 AM
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 Last Post bair
by bair
01-25-2012, 11:04 AM  
looking for .GFF / . GFF3 file repositories by delinquentme
Started by delinquentme, 01-23-2012, 08:32 PM
2 responses
3,178 views
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 Last Post delinquentme
by delinquentme
01-25-2012, 10:03 AM  
Filter out reads with several variants by david.tamborero
Started by david.tamborero, 01-25-2012, 09:31 AM
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 Last Post david.tamborero
by david.tamborero
01-25-2012, 09:31 AM  
enrichment in enhancers by maria_mari
Started by maria_mari, 01-25-2012, 09:23 AM
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 Last Post maria_mari
by maria_mari
01-25-2012, 09:23 AM  
Miso's open source by joyce kang
Started by joyce kang, 01-24-2012, 05:07 PM
1 response
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 Last Post Ole
by Ole
01-25-2012, 07:25 AM  
sorting vcf- can't get vcftools to work by shawpa
Started by shawpa, 01-20-2012, 05:00 AM
2 responses
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 Last Post Petr
by Petr
01-25-2012, 06:18 AM  
picard add read groups by HGENETIC
Started by HGENETIC, 01-25-2012, 04:19 AM
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 Last Post HGENETIC
by HGENETIC
01-25-2012, 04:19 AM  
illumina v illumina_long with MosaikBuild by kortschak
Started by kortschak, 01-24-2012, 10:59 PM
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 Last Post kortschak
by kortschak
01-24-2012, 10:59 PM  
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