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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
alignment reads in homologous region by m_elena_bioinfo
Started by m_elena_bioinfo, 03-16-2011, 05:37 AM
7 responses
3,547 views
0 reactions
 Last Post adamdeluca
by adamdeluca
03-16-2011, 07:27 AM  
SOAP de novo .config file for scafolding by Ashu
Started by Ashu, 03-16-2011, 06:55 AM
0 responses
3,979 views
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 Last Post Ashu
by Ashu
03-16-2011, 06:55 AM  
import .sam file to Geneious by slny
Started by slny, 03-16-2011, 06:55 AM
0 responses
2,919 views
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 Last Post slny
by slny
03-16-2011, 06:55 AM  
alignment and reference genome assembling by slny
Started by slny, 03-15-2011, 10:57 AM
3 responses
2,896 views
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 Last Post slny
by slny
03-16-2011, 06:49 AM  
Maq SNPfilter by Oxygen81
Started by Oxygen81, 03-16-2011, 02:20 AM
0 responses
1,742 views
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 Last Post Oxygen81
by Oxygen81
03-16-2011, 02:20 AM  
repetitive/duplicate reads by cedance
Started by cedance, 03-14-2011, 01:00 AM
7 responses
5,322 views
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 Last Post cedance
by cedance
03-16-2011, 01:12 AM  
Tmap: how to use it to construct genetic map with large-scale SNP markers by orctyr
Started by orctyr, 03-16-2011, 01:11 AM
0 responses
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 Last Post orctyr
by orctyr
03-16-2011, 01:11 AM  
Something like seqcleaner for fastq files? by hammerf
Started by hammerf, 02-22-2011, 07:46 AM
1 response
2,473 views
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 Last Post Jose Blanca
by Jose Blanca
03-16-2011, 12:22 AM  
GATK calling Merged Bam files by jayce_ocean
Started by jayce_ocean, 03-04-2011, 12:40 AM
3 responses
5,886 views
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 Last Post Jose Blanca
by Jose Blanca
03-16-2011, 12:15 AM  
Combining 454FLX and SOLiD runs for de novo genome assembly by Bukowski
Started by Bukowski, 01-04-2010, 02:47 AM
24 responses
11,465 views
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 Last Post sklages
by sklages
03-15-2011, 01:04 PM  
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