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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
IlluminaBasecallsToFastq by flcaza
Started by flcaza, 03-10-2017, 02:36 AM
7 responses
2,762 views
0 reactions
 Last Post flcaza
by flcaza
03-10-2017, 07:05 AM  
Next Generation sequencing and modern day research by nadia123
Started by nadia123, 03-09-2017, 11:13 AM
1 response
1,994 views
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 Last Post dcameron
by dcameron
03-09-2017, 05:58 PM  
Comparing RNA levels in tumor/normal samples using RNA-seq by Paul_N_Hengen
Started by Paul_N_Hengen, 03-09-2017, 02:01 PM
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2,406 views
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 Last Post Paul_N_Hengen
by Paul_N_Hengen
03-09-2017, 02:01 PM  
Exome sequencing analysis manual by ulz_peter
Started by ulz_peter, 09-13-2011, 01:24 AM
139 responses
80,492 views
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 Last Post hafiztalha
by hafiztalha
03-09-2017, 05:26 AM  
Recommended pipeline for differential miRNA-seq by AlexClop
Started by AlexClop, 02-10-2017, 07:32 AM
1 response
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 Last Post sbarberan
by sbarberan
03-08-2017, 11:22 PM  
smallRNA: how analyze by edeka
Started by edeka, 03-06-2017, 02:04 AM
1 response
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 Last Post sbarberan
by sbarberan
03-08-2017, 11:16 PM  
Illumina HiSeq library insert size by SDPA_Pet
Started by SDPA_Pet, 03-07-2017, 09:01 AM
21 responses
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 Last Post SDPA_Pet
by SDPA_Pet
03-08-2017, 08:51 AM  
GSEA: None of the gene sets passed the size thresholds by id0
Started by id0, 08-28-2013, 02:59 PM
3 responses
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 Last Post jamesjcai
by jamesjcai
03-08-2017, 08:42 AM  
incredible high memory consumption of bwa-mem on small amplicon dataset by LarsB
Started by LarsB, 03-08-2017, 05:44 AM
3 responses
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 Last Post GenoMax
by GenoMax
03-08-2017, 06:14 AM  
Meaning of the P-value relating to SNP (single nucleotide polymorphism) by nhaus
Started by nhaus, 03-06-2017, 04:32 AM
5 responses
6,209 views
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 Last Post mastal
by mastal
03-08-2017, 04:40 AM  
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