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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
0 reactions
 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,261 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Canu sensitivity to genomeSize parameter by jpummil
Started by jpummil, 09-28-2016, 09:01 AM
1 response
1,962 views
0 reactions
 Last Post rhall
by rhall
09-28-2016, 02:31 PM  
Help with HapTree reads input format by Phoenix_ICE
Started by Phoenix_ICE, 03-26-2015, 04:00 AM
2 responses
1,842 views
0 reactions
 Last Post Mel Martin
by Mel Martin
09-28-2016, 06:19 AM  
Can I remove index adapters after assembly? by Whitebark
Started by Whitebark, 09-27-2016, 01:04 PM
1 response
5,898 views
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 Last Post wdecoster
by wdecoster
09-27-2016, 09:11 PM  
Closed: Bioinformatics Lawsuit filed against Martin Luther University by narain
Started by narain, 09-06-2016, 01:16 AM
15 responses
4,127 views
0 reactions
 Last Post ECO
by ECO
09-27-2016, 12:55 PM  
Duplicate miRNAs with different read counts in miRDeep2 by apar
Started by apar, 09-27-2016, 08:16 AM
0 responses
3,600 views
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 Last Post apar
by apar
09-27-2016, 08:16 AM  
Sliding window SNP density analysis? by balaena
Started by balaena, 09-27-2016, 06:38 AM
0 responses
1,710 views
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 Last Post balaena
by balaena
09-27-2016, 06:38 AM  
Have variant call file, need to do snp counts (methylation counts) by Jon17
Started by Jon17, 09-26-2016, 01:12 PM
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 Last Post Jon17
by Jon17
09-26-2016, 01:12 PM  
How can I filter out reference sequences that get multiple hits in BWA MEM ? by Chrys
Started by Chrys, 09-26-2016, 06:29 AM
3 responses
2,259 views
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 Last Post HESmith
by HESmith
09-26-2016, 08:33 AM  
How to know if it is 'one-color' or 'two-color' microarray? by r4bioinf
Started by r4bioinf, 09-25-2016, 08:56 AM
2 responses
1,619 views
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 Last Post r4bioinf
by r4bioinf
09-26-2016, 07:59 AM  
New Book: 'Genetic Engineering Strategies' by narain
Started by narain, 09-22-2016, 01:16 AM
1 response
3,364 views
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 Last Post narain
by narain
09-26-2016, 03:57 AM  
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