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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Local variant database with web intereface for VCF by polpol
Started by polpol, 02-12-2015, 05:53 AM
1 response
1,566 views
0 reactions
 Last Post Bukowski
by Bukowski
02-12-2015, 11:57 AM  
cuffcompare class codes by leshkowitz
Started by leshkowitz, 01-04-2010, 01:51 AM
42 responses
19,643 views
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 Last Post BioCathy
by BioCathy
02-12-2015, 08:14 AM  
Pindel memory usage 30x whole genome by Nick
Started by Nick, 02-11-2015, 06:30 AM
3 responses
2,356 views
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 Last Post KaiYe
by KaiYe
02-12-2015, 07:40 AM  
How do you determine which a gene annotation is correct? by blairw
Started by blairw, 02-11-2015, 09:23 PM
2 responses
2,207 views
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 Last Post GenoMax
by GenoMax
02-12-2015, 05:19 AM  
Split SAM/BAM files into thousands of contigs by jazz
Started by jazz, 06-05-2013, 11:16 AM
16 responses
5,529 views
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 Last Post jjlaisnoopy
by jjlaisnoopy
02-11-2015, 10:25 PM  
SeqMonk Probe Trend Plot normalization question by wingless
Started by wingless, 02-11-2015, 08:38 PM
0 responses
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 Last Post wingless
by wingless
02-11-2015, 08:38 PM  
Samtools sort vs Picard Sortsam by rahul
Started by rahul, 03-25-2013, 12:40 PM
6 responses
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 Last Post dpryan
by dpryan
02-11-2015, 01:12 PM  
Want to create refGene.txt file for bacteria, problem compliling kent source by ketan_bnf
Started by ketan_bnf, 06-11-2011, 03:26 AM
11 responses
7,512 views
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 Last Post trakhtenberg
by trakhtenberg
02-11-2015, 01:03 PM  
HTSeq-count warning message by canhu
Started by canhu, 05-21-2013, 04:05 AM
27 responses
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 Last Post raphael123
by raphael123
02-11-2015, 12:02 PM  
Best statistical learning technique to analyze ChIP-seq data as predictors by zaratieg
Started by zaratieg, 02-11-2015, 06:23 AM
0 responses
1,415 views
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 Last Post zaratieg
by zaratieg
02-11-2015, 06:23 AM  
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