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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
0 reactions
 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
cufflinks segmentation fault and taking very long to run by Dessi
Started by Dessi, 06-26-2014, 08:07 AM
21 responses
9,992 views
0 reactions
 Last Post biocomputer
by biocomputer
01-07-2015, 02:53 PM  
Run cd-hit-para.pl on sge cluster by lzlgboy
Started by lzlgboy, 01-07-2015, 02:19 PM
0 responses
1,575 views
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 Last Post lzlgboy
by lzlgboy
01-07-2015, 02:19 PM  
DEXseq estimateDispersions error by dingdian110
Started by dingdian110, 06-27-2014, 08:16 AM
9 responses
4,181 views
0 reactions
 Last Post shikha5
by shikha5
01-07-2015, 06:22 AM  
genomic positions on both directions by carolW
Started by carolW, 01-06-2015, 02:03 AM
6 responses
1,749 views
0 reactions
 Last Post carolW
by carolW
01-07-2015, 04:33 AM  
OTU from Qiime biom file not showing up in Megan tree? by khoojj
Started by khoojj, 01-06-2015, 05:11 PM
0 responses
1,892 views
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 Last Post khoojj
by khoojj
01-06-2015, 05:11 PM  
Question about Qiime otu picking by illuminaGA
Started by illuminaGA, 01-06-2015, 10:08 AM
0 responses
1,627 views
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 Last Post illuminaGA
by illuminaGA
01-06-2015, 10:08 AM  
ChiP-Seq Biological Replicates for Broad Histone Marks by Neberir
Started by Neberir, 01-05-2015, 11:37 AM
2 responses
2,475 views
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 Last Post Neberir
by Neberir
01-06-2015, 07:25 AM  
A strange size difference of fastq file by qinhao13
Started by qinhao13, 01-06-2015, 01:47 AM
1 response
2,153 views
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 Last Post dariober
by dariober
01-06-2015, 02:56 AM  
DESeq2 model matrix formula by dmosk
Started by dmosk, 10-22-2014, 10:50 PM
35 responses
17,702 views
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 Last Post Michael Love
by Michael Love
01-05-2015, 03:42 PM  
DESeq2 : design for estimating effects of treatment at various time points by chris_s
Started by chris_s, 10-30-2014, 12:42 AM
6 responses
5,526 views
0 reactions
 Last Post Michael Love
by Michael Love
01-05-2015, 03:39 PM  
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