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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Intrasample exon analysis of RNA-Seq data using RPKM values by desmo
Started by desmo, 09-04-2014, 02:57 AM
0 responses
1,765 views
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 Last Post desmo
by desmo
09-04-2014, 02:57 AM  
GATK complains that my bam file isn't indexed by efoss
Started by efoss, 10-14-2011, 01:35 PM
9 responses
15,676 views
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 Last Post 1520191
by 1520191
09-04-2014, 12:44 AM  
RIP-Seq or finding binding sites of protein to RNA by MayaAM
Started by MayaAM, 09-03-2014, 11:29 PM
0 responses
1,167 views
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 Last Post MayaAM
by MayaAM
09-03-2014, 11:29 PM  
extract GO enrichment by tinguzman
Started by tinguzman, 09-03-2014, 11:05 PM
0 responses
1,177 views
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 Last Post tinguzman
by tinguzman
09-03-2014, 11:05 PM  
Any ideas on publishable small genomics projects for students by pepperoni
Started by pepperoni, 09-03-2014, 02:15 PM
3 responses
1,901 views
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 Last Post pepperoni
by pepperoni
09-03-2014, 03:39 PM  
NGS raw data urgently needed for student project processing by pepperoni
Started by pepperoni, 09-03-2014, 01:51 PM
5 responses
2,220 views
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 Last Post Brian Bushnell
by Brian Bushnell
09-03-2014, 03:16 PM  
SNPs and population affinity by arnikastern
Started by arnikastern, 09-03-2014, 06:29 AM
1 response
1,471 views
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 Last Post SrCardgage
by SrCardgage
09-03-2014, 03:16 PM  
Tophat - Error: gtf_to_fasta returned an error. by papori
Started by papori, 02-09-2012, 04:24 AM
8 responses
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 Last Post tulipnandu
by tulipnandu
09-03-2014, 02:16 PM  
Adding annotations on concatenated genes by Sergioo
Started by Sergioo, 09-03-2014, 11:14 AM
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 Last Post Sergioo
by Sergioo
09-03-2014, 11:14 AM  
TPM vs RPKM by Benh
Started by Benh, 09-03-2014, 08:46 AM
3 responses
8,658 views
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 Last Post Benh
by Benh
09-03-2014, 09:42 AM  
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