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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
velvet on csfasta data by kishore
Started by kishore, 12-09-2013, 01:46 AM
0 responses
1,195 views
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 Last Post kishore
by kishore
12-09-2013, 01:46 AM  
RefSeq file by omerfaruk
Started by omerfaruk, 12-09-2013, 01:10 AM
0 responses
36 views
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 Last Post omerfaruk
by omerfaruk
12-09-2013, 01:10 AM  
Pre-written tools for gene burden tests? by Sarutahiko
Started by Sarutahiko, 12-08-2013, 09:39 PM
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2,042 views
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 Last Post Sarutahiko
by Sarutahiko
12-08-2013, 09:39 PM  
About Segfault in samtools by xiaoshuai
Started by xiaoshuai, 12-07-2013, 01:33 AM
5 responses
3,997 views
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 Last Post xiaoshuai
by xiaoshuai
12-08-2013, 05:36 PM  
Tophat2 stucked by Joshua_HIT
Started by Joshua_HIT, 12-07-2013, 06:06 AM
4 responses
2,865 views
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 Last Post Joshua_HIT
by Joshua_HIT
12-08-2013, 02:36 AM  
tophat2 mapping PE and SE reads simultaneously by evanharrell
Started by evanharrell, 12-06-2013, 03:14 AM
1 response
2,776 views
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 Last Post mastal
by mastal
12-06-2013, 01:01 PM  
mate alignment error when running ValidateSamFile in Picard by slowsmile
Started by slowsmile, 02-16-2012, 12:10 PM
5 responses
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 Last Post raphael123
by raphael123
12-06-2013, 12:40 PM  
Transcriptome reconstruction from RNA-seq data using Scripture. by Joker!sAce
Started by Joker!sAce, 08-06-2011, 06:19 AM
13 responses
6,699 views
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 Last Post 11xinqi
by 11xinqi
12-06-2013, 12:31 PM  
visualizing scripture output BED by chrisbala
Started by chrisbala, 01-24-2011, 11:03 AM
6 responses
4,039 views
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 Last Post 11xinqi
by 11xinqi
12-06-2013, 12:05 PM  
Has anyone tried comparing accuracy using different library preps? by oiiio
Started by oiiio, 12-06-2013, 09:04 AM
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1,931 views
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 Last Post oiiio
by oiiio
12-06-2013, 09:04 AM  
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