Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • OpenGE on Redhat

    Hi

    I am trying to get the openGE binaries working on Redhat enterprise machines. openge fails with the following error:


    Code:
    openge: symbol lookup error: openge: undefined symbol: _ZZN8BamTools12IBamIODevice14SetErrorStringERKSsS2_E9SEPARATOR
    I am using Redhat 6, linux 64-bit.

    Code:
    Linux 2.6.18-238.el5 #1 SMP Sun Dec 19 14:22:44 EST 2010 x86_64 x86_64 x86_64 GNU/Linux
    Is there something I am missing?

  • #2
    We tested the binaries on an EC2 image of RHEL. It works fine there. However, we will take a look at a local installation of RedHat to see if we can reproduce the error as we would like users to be able to get going with the binaries.

    In the worst case, you would have to install zlib, boost, and bamtools; and then compile from source.

    Hopefully by the next release we can supplement the binaries with RPM and DEB packages. Should make install easier.

    Comment


    • #3
      We now have an RPM for OpenGE! Send me a direct PM and ill share it with you. The next release of OpenGE will feature source, binaries, RPM, and DEB.

      Comment

      Latest Articles

      Collapse

      • seqadmin
        Understanding Genetic Influence on Infectious Disease
        by seqadmin




        During the COVID-19 pandemic, scientists observed that while some individuals experienced severe illness when infected with SARS-CoV-2, others were barely affected. These disparities left researchers and clinicians wondering what causes the wide variations in response to viral infections and what role genetics plays.

        Jean-Laurent Casanova, M.D., Ph.D., Professor at Rockefeller University, is a leading expert in this crossover between genetics and infectious...
        09-09-2024, 10:59 AM
      • seqadmin
        Addressing Off-Target Effects in CRISPR Technologies
        by seqadmin






        The first FDA-approved CRISPR-based therapy marked the transition of therapeutic gene editing from a dream to reality1. CRISPR technologies have streamlined gene editing, and CRISPR screens have become an important approach for identifying genes involved in disease processes2. This technique introduces targeted mutations across numerous genes, enabling large-scale identification of gene functions, interactions, and pathways3. Identifying the full range...
        08-27-2024, 04:44 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by seqadmin, Today, 06:25 AM
      0 responses
      13 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, Yesterday, 01:02 PM
      0 responses
      12 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 09-18-2024, 06:39 AM
      0 responses
      14 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 09-11-2024, 02:44 PM
      0 responses
      14 views
      0 likes
      Last Post seqadmin  
      Working...
      X