sequencing technologies overview

[Chipper]

Some additions to the list:

* Mobious: Nexus I

http://www.mobious.com/mobious_products/page18/page18.html

* Illumina: Avantome (pyrosequencing)
* Polonator (MPS by ligation)
* Cracker (SMRT on a chip) http://www.crackerbio.com/

[flxlex]

@ECO: yes, why not have the Pipeline for "those that either have a commercially released instrument, or are well on their way". I guess you can be the judge, and we'll protest if we don't agree a certain system falls under the definition :-)

[ECO]

"Single Molecule" I think is what you're looking for vs. "single strand"

[strob]

indeed, I adjusted the list: Ion Torrent (Post-Light Sequencing™ technology)

Thanks

[GW_OK]

I think Complete Genomics is best served with the Service Providers forum. How about a "single molecule sequencing" forum.

PS Ion Torrent isn't single strand sequencing.

[ECO]

What do you all think, is it time to expand "The Pipeline" forum into more companies (the list above being a great start)?

My rule was previously that you had to have a commercially released instrument, but I think there is definitely room for more discussion that one forum allows.

Thoughts?

[LisaOsborne]

Ah, wishful thinking then!

[strob]

that's why they are number 13 in my list (speaking as a plant scientist) ;-)

[LisaOsborne]

AGBT 2010 sequencing technology summary

Complete Genomics (http://www.completegenomics.com/) provides large-scale sequencing of human genomes as a service. Its focus hasn't changed.

[strob]

I thought that Bionanomatrix only provides chips to line up the DNA, but they don't do any sequencing themselves...

[nilshomer]

Dear all,

after attending the AGBT2010 meeting, I made this list of potential sequencing technologies out there. Is this list complete?

1. illumina (GAIIx, HisSeq2000) (http://www.illumina.com/applications/sequencing.ilmn)
2. Roche (454 Genome Sequencer FLX, GS Junior) (http://454.com/products-solutions/45...-portfolio.asp)
3. Life Technologies (SOLiD, Single Strand Sequencing) (http://www.lifetechnologies.com/sequencing.html)
4. Helicos (Single Strand Sequencing) (http://www.helicosbio.com/)
5. Pacific Biosciences (Real Time Single Strand Sequencing) (http://www.pacificbiosciences.com/)
6. Ion Torrent (Single strand Sequencing) (http://www.iontorrent.com/)
7. Oxford nanopore (Single Strand) (http://www.nanoporetech.com/)
8. IBM nanopore sequencing (Single Strand) (http://www-03.ibm.com/press/us/en/pr...ease/28558.wss)
9. Nabsys (nanopore + electronic sequencing) (http://www.nabsys.com/)
10. ZS Genetics (http://www.zsgenetics.com/)
11. Visigen (http://genomics.xprize.org/teams/vis...chnologies-inc)
12. Halcyon Molecular (http://www.halcyonmolecular.com/)
13. Complete Genomics (only human till now) (http://www.completegenomics.com/)
14. ...?

Hope this could be helpful,

Steven

http://www.bionanomatrix.com/

[strob]

Dear all,

after attending the AGBT2010 meeting, I made this list of potential sequencing technologies out there. Is this list complete?

1. illumina (Avantome, GAIIx, HisSeq2000) (http://www.illumina.com/applications/sequencing.ilmn)
2. Roche (454 Genome Sequencer FLX, GS Junior) (http://454.com/products-solutions/45...-portfolio.asp)
3. Life Technologies (SOLiD, Single Molecule Sequencing) (http://www.lifetechnologies.com/sequencing.html)
4. Helicos (True Single Molecule Sequencing) (http://www.helicosbio.com/)
5. Pacific Biosciences (Real Time Single Molecule Sequencing) (http://www.pacificbiosciences.com/)
6. Ion Torrent (Post-Light Sequencing™ technology) (http://www.iontorrent.com/)
7. Oxford nanopore (Single Molecule Sequencing) (http://www.nanoporetech.com/)
8. IBM nanopore sequencing (Single Molecule Sequencing) (http://www-03.ibm.com/press/us/en/pr...ease/28558.wss)
9. Nabsys (nanopore + electronic sequencing) (http://www.nabsys.com/)
10. ZS Genetics (http://www.zsgenetics.com/)
11. Visigen (http://genomics.xprize.org/teams/vis...chnologies-inc)
12. Halcyon Molecular (http://www.halcyonmolecular.com/)
13. Complete Genomics (only human till now) (http://www.completegenomics.com/)
14. Mobious (Nexus I) (http://www.mobious.com/mobious_produ...18/page18.html)
15. Polonator (MPS by ligation) (http://www.polonator.org/)
16. Cracker (SMRT on a chip) http://www.crackerbio.com/
17. Kavli Institute of Nanoscience; Graphene Nanopores (http://arxiv.org/ftp/arxiv/papers/1005/1005.4754.pdf)
18. ...

Hope this could be helpful,

Steven