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  • lukas1848
    Member
    • Jun 2011
    • 54

    #16
    Didn't you say that these duplicate reads are actually found twice in the original fastq file? Maybe I just didn't get that right.

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    • jimineep
      Member
      • Sep 2011
      • 10

      #17
      The read I showed is found twice, and there are other examples, but it is not as common as I initially thought. Indeed, as gringer pointed out, the same read being found twice in the same file is not unlikely if you sequence a highly expressed gene?

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