what specific sequence is used for annealing to flow cell?

[ein_io]

I am designing my own adapters
and need to know which specific sequence is actually used for the annealing to the flow cell.

I understand it is there inside the PE PCR primers sequence but I 'd like to specifically know which part of it, to properly judge what can I change/retain.

Thanks million for any suggestions!!

[huguesparri]

Hello,
I think you can have a part of your answer here:
http://seqanswers.com/forums/attachm...8&d=1239052303

[bbeitzel]

Here is a diagram that I drew up of the TruSeq process. The bridge PCR sequences (the oligos attached to the flow cell) are shown at the bottom of the diagram.

[ein_io]

Thanks!

Thank you very much huguesparri and bbeitzel!!
That is what I was looking for