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  • Greg
    Member
    • Oct 2009
    • 31

    #1

    Can I get the Illumina model from a machines name?

    Hi All,
    I understand that the header in Illumina Fastq files contains the name of the machine that carried out the sequencing. Is it possible to figure out what model the machine was (GAII vs HighSeq 1000 or 2000 etc)?
    For example:
    HWI-EAS407_0000 or SOLEXA3_175
    thanks!
  • GenoMax
    Senior Member
    • Feb 2008
    • 7142

    #2
    May be .. unless the default name assigned by the instrument software for a flowcell was changed by the owner of the machine.
    Last edited by GenoMax; 11-26-2014, 01:59 PM.

    Comment

    • Greg
      Member
      • Oct 2009
      • 31

      #3
      Great! ...can you give me an idea how?

      Comment

      • GenoMax
        Senior Member
        • Feb 2008
        • 7142

        #4
        Disclaimer: I don't think there is a way to be 100% sure, unless you knew where the data came from.

        Take the following with a pound of salt :-)

        MiSeq - HWI-M0XXXX
        HiSeq (2000) - HWI-SXXXX
        HiSeq (2500) - HWI-DXXXX

        Perhaps others can add to this list (especially if their machines are using stock identifiers).
        Last edited by GenoMax; 12-01-2014, 06:06 AM.

        Comment

        • Greg
          Member
          • Oct 2009
          • 31

          #5
          Very cool. I'd be happy to annotate/maintain a list or spreadsheet as a resource if people want to contribute. There is one in my building I can add!
          HighSeq 2000: HWI-ST765

          Comment

          • sklages
            Senior Member
            • May 2008
            • 628

            #6
            NextSeq 500: NS<SerialNumber>, e.g. NS500123

            Comment

            • dariober
              Senior Member
              • May 2010
              • 311

              #7
              Originally posted by Greg View Post
              Is it possible to figure out what model the machine was (GAII vs HighSeq 1000 or 2000 etc)?
              Why don't you drop an email to Illumina directly? I don't see why they shouldn't answer you. (By the way, I've been wondering the same question although I never needed an answer...!)

              Comment

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