We have our first HiSeq here at IGS but it will take 2-3 weeks before we will have production data. For now there will be some testing runs.
What I do know is, the final output is a BCL file from two flow cells, binary equivalent of qseq which can be converted back to qseq using a Illumina supplied converter. The downstream analysis from that point is same as of GA.
Hope this helps!
-Abhi
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I don't have first experience... Maybe someone at the Broad institute will soon be able to comment, since they just purchased 51!
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HiSeq2000
Hello everybody,
since the new HiSeq2000 device is out now i was wondering whether anyone does already have some first hand experience and could comment on the performance/reliability of the machine. Could it recommendable to wait before investing into sequencing with this platform?
Thanks in advance!
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