Different read length sequencing datasets

[g781]

Hi all,

I have two Illumina solexa sequencing dataset, one of the read lengths is 35bp, other is 75bp. Whether the different read length sequencing datasets may effect the analyzed results.

[mgogol]

If it does, you could always trim the 75 base reads to 35 using fastx and realign.

[g781]

I see, thank for your helping.