Hi,
I'm making a wrapper for demultiplexing with bcl2fastq2 Conversion Software v2.17. Following demultiplexing I would like to collect various statistics from the run in a file.
It is fairly easy to get raw cluster counters, PF cluster counts etc. However I'm having problems finding a file that contains information about the cluster density.
I know that it can be found in the interop folder in binary format, and viewed with the Sequence Analysis Viewer, but I would like to collect it in a single file for later use.
Any Ideas?
I'm making a wrapper for demultiplexing with bcl2fastq2 Conversion Software v2.17. Following demultiplexing I would like to collect various statistics from the run in a file.
It is fairly easy to get raw cluster counters, PF cluster counts etc. However I'm having problems finding a file that contains information about the cluster density.
I know that it can be found in the interop folder in binary format, and viewed with the Sequence Analysis Viewer, but I would like to collect it in a single file for later use.
Any Ideas?
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