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  • Dr. Hybe
    Member
    • Jun 2009
    • 14

    #1

    What happens try to amp/lin/block/hyb paired end libraries on a single read flowcell?

    Are the adapters the same or will this make a difference. Thanks
  • hoisinjl
    Member
    • Jun 2009
    • 23

    #2
    Libraries that are prepared as paired-end libraries, will work on single-read flowcells without a problem.

    Comment

    • gro-seeker
      Junior Member
      • Dec 2010
      • 2

      #3
      Originally posted by hoisinjl View Post
      Libraries that are prepared as paired-end libraries, will work on single-read flowcells without a problem.
      What about the other way around? Could libraries prepared as single-read libraries (eg. with the small RNA sequencing adapters & primers) be run on paired-end flowcells?

      It looks to me like the adapter sequences are different, and that it wouldn't work the other way around.

      Any thoughts?

      Comment

      • kmcarr
        Senior Member
        • May 2008
        • 1181

        #4
        Originally posted by gro-seeker View Post
        What about the other way around? Could libraries prepared as single-read libraries (eg. with the small RNA sequencing adapters & primers) be run on paired-end flowcells?
        No, libraries prepared with single read kits are not compatible with paired end cluster generation kits and flowcells.

        Comment

        • gro-seeker
          Junior Member
          • Dec 2010
          • 2

          #5
          All right, thanks so much! We'll have to go with single reads then.

          Comment

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