I'm running some denovo sequencing tools (SSAKE & Velvet) to build contigs from illumina data.
But somehow the tools don't seem to test & match the reverse complements of the sequences -- it seems like they assume all sequences are from the same strand. is this true??
Thanks
Jason
But somehow the tools don't seem to test & match the reverse complements of the sequences -- it seems like they assume all sequences are from the same strand. is this true??
Thanks
Jason
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