I've had these reads in Fastq format from an Illumina machine but noticed the paired end names are not ending in the usual /1 and /2, but instead /1 and /3. Picard doesn't handle these properly. I want to check this doesn't have another meaning I should know about.
Thanks.
First end:
second end:
Thanks.
First end:
Code:
@SequenceIdentifier#0/1 [base calls] +SequenceIdentifier#0/1 [quality scores]
Code:
@SequenceIdentifier#0/3 [base calls] +SequenceIdentifier#0/3 [quality scores]
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