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Does exists some repository with bam/fastq files?

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  • Does exists some repository with bam/fastq files?

    Hi everybody

    I am trying to set up a pipeline for detecting large gene deletions. I think the samples that I am testing don't contain this kind of deletions. I would like to test the pipeline with a well-known sample. There is some repository where to download files that i could use?

    thanks

  • #2
    The ENA and the SRA.

    http://www.ebi.ac.uk/ena

    http://www.ncbi.nlm.nih.gov/sra

    You coud try some well-studied samples from the 1000 genomes project.

    http://www.1000genomes.org/

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